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27 Aug 2013 You could choose the Blast output format by setting -outfmt. But if it can be opened by excel or be imported in to R, you could get what you want then. as "hit table.csv" file under the "download" option on the results page. For downloading complete data sets we recommend using ftp.uniprot.org. If you are located in Europe, the Middle East or Africa, you may want to download data The Hit Table Panel BLAST results page panel header: hit graphs BLAST results Click on Export to Excel or Export as .fasta to save your results in Excel or the progress of the ClustalW program along with a button "Download To File". On the Blast Metrics page, the right side of the filter bar will have three dots. Click on the three dots and select on Save as CSV or Save as Excel option. 29 Jul 2019 Create a taxonomic mapping file to Make Blast Database within OmicsBox mapping file from a fasta file that has been downloaded from NCBI. The final tab delimited taxonomy ID file, that can be easily created with Excel A free online tool is available for the BLAST analysis of sequences of amplicons list of all SepsiTest™ BLAST entries within an Excel file - download Excel file. import re with open('BLASToutput.csv') as f: # read the file line by line for line in f: # skip comments (or maybe leave as it is) if line.startswith('#'):
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